Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Gm15515-201ENSMUST00000117827 822 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sod1P08228 Gm9211-201ENSMUST00000182882 975 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Gm44958-201ENSMUST00000203734 736 ntBASIC11.89□□□□□ -0.51
Sod1P08228 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.89□□□□□ -0.51
Sod1P08228 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Sod1P08228 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Sod1P08228 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sod1P08228 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sod1P08228 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.88□□□□□ -0.51
Sod1P08228 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sod1P08228 Gm13611-201ENSMUST00000118269 318 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12616-201ENSMUST00000118594 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.88□□□□□ -0.51
Sod1P08228 Gm12624-201ENSMUST00000177615 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12621-201ENSMUST00000177760 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12615-201ENSMUST00000177970 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12622-201ENSMUST00000177975 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12627-201ENSMUST00000178412 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12625-201ENSMUST00000179122 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12614-201ENSMUST00000179586 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm12613-201ENSMUST00000180323 382 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Gm43962-201ENSMUST00000203898 190 ntBASIC11.88□□□□□ -0.51
Sod1P08228 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Sod1P08228 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sod1P08228 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sod1P08228 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.88□□□□□ -0.51
Sod1P08228 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Sod1P08228 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.88□□□□□ -0.51
Sod1P08228 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Sod1P08228 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sod1P08228 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sod1P08228 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sod1P08228 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sod1P08228 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sod1P08228 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.87□□□□□ -0.51
Sod1P08228 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sod1P08228 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sod1P08228 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms