Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.2□□□□□ -0.62
P04224 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P04224 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.19□□□□□ -0.62
P04224 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
P04224 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 Gm3436-201ENSMUST00000179930 840 ntBASIC11.19□□□□□ -0.62
P04224 Mir7221-201ENSMUST00000184009 72 ntBASIC11.19□□□□□ -0.62
P04224 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.19□□□□□ -0.62
P04224 Gm27430-201ENSMUST00000184585 107 ntBASIC11.19□□□□□ -0.62
P04224 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 Gm44333-201ENSMUST00000197168 107 ntBASIC11.19□□□□□ -0.62
P04224 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.19□□□□□ -0.62
P04224 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Gm45841-201ENSMUST00000207700 164 ntBASIC11.19□□□□□ -0.62
P04224 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.19□□□□□ -0.62
P04224 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.19□□□□□ -0.62
P04224 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.19□□□□□ -0.62
P04224 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P04224 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P04224 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
P04224 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.18□□□□□ -0.62
P04224 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
P04224 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P04224 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P04224 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.18□□□□□ -0.62
P04224 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.18□□□□□ -0.62
P04224 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P04224 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.18□□□□□ -0.62
P04224 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.18□□□□□ -0.62
P04224 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.18□□□□□ -0.62
P04224 Gm2756-201ENSMUST00000195851 400 ntBASIC11.18□□□□□ -0.62
P04224 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.18□□□□□ -0.62
P04224 Gm44344-201ENSMUST00000200287 129 ntBASIC11.18□□□□□ -0.62
P04224 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.18□□□□□ -0.62
P04224 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P04224 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P04224 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.18□□□□□ -0.62
P04224 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P04224 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
P04224 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P04224 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P04224 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04224 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04224 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P04224 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms