Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Gm44069-201ENSMUST00000204898 506 ntBASIC10.04□□□□□ -0.8
P01788 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.04□□□□□ -0.8
P01788 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.04□□□□□ -0.8
P01788 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.04□□□□□ -0.8
P01788 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
P01788 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
P01788 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P01788 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
P01788 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.03□□□□□ -0.8
P01788 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.03□□□□□ -0.8
P01788 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.03□□□□□ -0.8
P01788 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Gm44124-201ENSMUST00000204159 472 ntBASIC10.03□□□□□ -0.8
P01788 Gm18307-201ENSMUST00000206864 949 ntBASIC10.03□□□□□ -0.8
P01788 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.03□□□□□ -0.8
P01788 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.03□□□□□ -0.8
P01788 Gm6983-201ENSMUST00000214912 628 ntBASIC10.03□□□□□ -0.8
P01788 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.03□□□□□ -0.8
P01788 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.03□□□□□ -0.8
P01788 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
P01788 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
P01788 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P01788 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.03□□□□□ -0.8
P01788 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P01788 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.03□□□□□ -0.8
P01788 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.03□□□□□ -0.8
P01788 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P01788 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms