Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.37□□□□□ -0.59
CcnkO88874 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CcnkO88874 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CcnkO88874 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CcnkO88874 Gm26464-201ENSMUST00000157094 305 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gm42612-201ENSMUST00000197986 623 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Gm43170-201ENSMUST00000199827 612 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.37□□□□□ -0.59
CcnkO88874 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CcnkO88874 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CcnkO88874 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.37□□□□□ -0.59
CcnkO88874 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CcnkO88874 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CcnkO88874 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CcnkO88874 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CcnkO88874 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.36□□□□□ -0.59
CcnkO88874 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.36□□□□□ -0.59
CcnkO88874 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm16215-201ENSMUST00000161990 637 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Mir6977-201ENSMUST00000184960 64 ntBASIC11.36□□□□□ -0.59
CcnkO88874 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm7730-201ENSMUST00000212486 454 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 Gm19220-201ENSMUST00000222682 803 ntBASIC11.36□□□□□ -0.59
CcnkO88874 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.36□□□□□ -0.59
CcnkO88874 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CcnkO88874 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CcnkO88874 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.36□□□□□ -0.59
CcnkO88874 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CcnkO88874 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CcnkO88874 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms