Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Olfr582-201ENSMUST00000098212 960 ntBASIC12.51□□□□□ -0.41
ClppO88696 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.51□□□□□ -0.41
ClppO88696 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.51□□□□□ -0.41
ClppO88696 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClppO88696 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Gm22018-201ENSMUST00000104357 131 ntBASIC12.5□□□□□ -0.41
ClppO88696 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Gm7029-201ENSMUST00000173226 450 ntBASIC12.5□□□□□ -0.41
ClppO88696 Gm43133-201ENSMUST00000197472 463 ntBASIC12.5□□□□□ -0.41
ClppO88696 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.5□□□□□ -0.41
ClppO88696 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.5□□□□□ -0.41
ClppO88696 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ClppO88696 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ClppO88696 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.5□□□□□ -0.41
ClppO88696 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.5□□□□□ -0.41
ClppO88696 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClppO88696 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ClppO88696 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClppO88696 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClppO88696 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.49□□□□□ -0.41
ClppO88696 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.49□□□□□ -0.41
ClppO88696 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Mir686-201ENSMUST00000102174 109 ntBASIC12.49□□□□□ -0.41
ClppO88696 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.49□□□□□ -0.41
ClppO88696 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ClppO88696 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ClppO88696 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.49□□□□□ -0.41
ClppO88696 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ClppO88696 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms