Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cops4O88544 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cops4O88544 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cops4O88544 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cops4O88544 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cops4O88544 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.76□□□□□ -0.53
Cops4O88544 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cops4O88544 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Gm38144-201ENSMUST00000192790 465 ntBASIC11.75□□□□□ -0.53
Cops4O88544 Gm9797-201ENSMUST00000052902 613 ntBASIC11.75□□□□□ -0.53
Cops4O88544 Gm24447-201ENSMUST00000083977 338 ntBASIC11.75□□□□□ -0.53
Cops4O88544 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cops4O88544 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cops4O88544 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.75□□□□□ -0.53
Cops4O88544 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cops4O88544 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.74□□□□□ -0.53
Cops4O88544 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.74□□□□□ -0.53
Cops4O88544 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Gm29667-201ENSMUST00000190817 490 ntBASIC11.74□□□□□ -0.53
Cops4O88544 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.74□□□□□ -0.53
Cops4O88544 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Cops4O88544 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.74□□□□□ -0.53
Cops4O88544 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cops4O88544 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops4O88544 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cops4O88544 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cops4O88544 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cops4O88544 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.73□□□□□ -0.53
Cops4O88544 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm15920-201ENSMUST00000118998 402 ntBASIC11.73□□□□□ -0.53
Cops4O88544 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops4O88544 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.73□□□□□ -0.53
Cops4O88544 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms