Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx3O70137 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx3O70137 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Gm5687-201ENSMUST00000118252 640 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.74□□□□□ -0.53
Alx3O70137 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Alx3O70137 Gm29608-201ENSMUST00000190444 463 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Ighv10-4-201ENSMUST00000193702 299 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.74□□□□□ -0.53
Alx3O70137 Gm44548-201ENSMUST00000208929 192 ntBASIC11.74□□□□□ -0.53
Alx3O70137 AC129323.1-201ENSMUST00000216733 470 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx3O70137 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Alx3O70137 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.74□□□□□ -0.53
Alx3O70137 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.74□□□□□ -0.53
Alx3O70137 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx3O70137 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Gm6447-201ENSMUST00000118905 835 ntBASIC11.73□□□□□ -0.53
Alx3O70137 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC11.73□□□□□ -0.53
Alx3O70137 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Auts2-212ENSMUST00000178555 309 ntBASIC11.73□□□□□ -0.53
Alx3O70137 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Mir7654-201ENSMUST00000185082 70 ntBASIC11.73□□□□□ -0.53
Alx3O70137 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Gm6983-201ENSMUST00000214912 628 ntBASIC11.73□□□□□ -0.53
Alx3O70137 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.73□□□□□ -0.53
Alx3O70137 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.73□□□□□ -0.53
Alx3O70137 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.73□□□□□ -0.53
Alx3O70137 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Alx3O70137 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Alx3O70137 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Alx3O70137 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx3O70137 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Alx3O70137 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Alx3O70137 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Alx3O70137 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx3O70137 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms