Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.2■□□□□ 0.66
Polr1aO35134 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC19.2■□□□□ 0.66
Polr1aO35134 Mir6958-201ENSMUST00000184207 73 ntBASIC19.2■□□□□ 0.66
Polr1aO35134 Gm28686-201ENSMUST00000187404 609 ntBASIC19.2■□□□□ 0.66
Polr1aO35134 Gm18974-201ENSMUST00000221478 1031 ntBASIC19.2■□□□□ 0.66
Polr1aO35134 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Polr1aO35134 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Gm45706-201ENSMUST00000213063 2136 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Polr1aO35134 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Gm14314-201ENSMUST00000118225 1015 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Gm5778-201ENSMUST00000171003 1072 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Gm44270-201ENSMUST00000203084 1234 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Gm44882-201ENSMUST00000205702 802 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19.19■□□□□ 0.66
Polr1aO35134 Gm18041-201ENSMUST00000218210 618 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC19.19■□□□□ 0.66
Polr1aO35134 CT009713.8-202ENSMUST00000224732 385 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Polr1aO35134 AC126257.1-201ENSMUST00000213195 1536 ntBASIC19.19■□□□□ 0.66
Polr1aO35134 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Polr1aO35134 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Gm10152-201ENSMUST00000193475 1344 ntBASIC19.18■□□□□ 0.66
Polr1aO35134 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Gm8731-201ENSMUST00000118088 412 ntBASIC19.18■□□□□ 0.66
Polr1aO35134 Gm8815-201ENSMUST00000173809 620 ntBASIC19.18■□□□□ 0.66
Polr1aO35134 Gm6407-201ENSMUST00000176468 549 ntBASIC19.18■□□□□ 0.66
Polr1aO35134 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Gm17931-201ENSMUST00000208132 634 ntBASIC19.18■□□□□ 0.66
Polr1aO35134 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC19.18■□□□□ 0.66
Polr1aO35134 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Polr1aO35134 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Polr1aO35134 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Polr1aO35134 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm22711-201ENSMUST00000116890 133 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm11892-201ENSMUST00000117711 1202 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm23045-201ENSMUST00000175041 96 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm5714-201ENSMUST00000197343 566 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm45575-201ENSMUST00000210283 548 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm37131-201ENSMUST00000192502 1561 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 AC169511.2-201ENSMUST00000226674 2063 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Polr1aO35134 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Polr1aO35134 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms