Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cnih2O35089 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cnih2O35089 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cnih2O35089 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.22□□□□□ -0.61
Cnih2O35089 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.22□□□□□ -0.61
Cnih2O35089 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Cnih2O35089 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.22□□□□□ -0.61
Cnih2O35089 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gm27525-201ENSMUST00000184465 107 ntBASIC11.22□□□□□ -0.61
Cnih2O35089 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.22□□□□□ -0.61
Cnih2O35089 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.22□□□□□ -0.61
Cnih2O35089 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gm7774-201ENSMUST00000200064 533 ntBASIC11.22□□□□□ -0.61
Cnih2O35089 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.22□□□□□ -0.61
Cnih2O35089 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cnih2O35089 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cnih2O35089 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cnih2O35089 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cnih2O35089 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cnih2O35089 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.21□□□□□ -0.61
Cnih2O35089 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Cnih2O35089 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.21□□□□□ -0.61
Cnih2O35089 Gm25144-201ENSMUST00000179561 110 ntBASIC11.21□□□□□ -0.61
Cnih2O35089 Gm25352-201ENSMUST00000179815 110 ntBASIC11.21□□□□□ -0.61
Cnih2O35089 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.21□□□□□ -0.61
Cnih2O35089 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.21□□□□□ -0.61
Cnih2O35089 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.21□□□□□ -0.61
Cnih2O35089 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cnih2O35089 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cnih2O35089 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Cnih2O35089 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cnih2O35089 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.2□□□□□ -0.62
Cnih2O35089 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cnih2O35089 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cnih2O35089 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms