Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm22331-201ENSMUST00000158066 136 ntBASIC12.38□□□□□ -0.43
Gm340F6RGI3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm19931-201ENSMUST00000198920 368 ntBASIC12.38□□□□□ -0.43
Gm340F6RGI3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm16372-201ENSMUST00000073088 450 ntBASIC12.38□□□□□ -0.43
Gm340F6RGI3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.38□□□□□ -0.43
Gm340F6RGI3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.38□□□□□ -0.43
Gm340F6RGI3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm340F6RGI3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.37□□□□□ -0.43
Gm340F6RGI3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm340F6RGI3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm340F6RGI3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm340F6RGI3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms