Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Gm13097-201ENSMUST00000210722 397 ntBASIC12.57□□□□□ -0.4
Srp54bE9PXC0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm11930-201ENSMUST00000117788 190 ntBASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm12997-201ENSMUST00000120207 640 ntBASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm15547-201ENSMUST00000122152 333 ntBASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Srp54bE9PXC0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm15276-201ENSMUST00000145953 498 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Mir3102-201ENSMUST00000175555 104 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm38317-201ENSMUST00000195564 343 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms