Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm26185-201ENSMUST00000157692 266 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm42693-201ENSMUST00000196779 631 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.42□□□□□ -0.42
Clip3B9EHT4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clip3B9EHT4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.41□□□□□ -0.42
Clip3B9EHT4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Gm5187-201ENSMUST00000117317 991 ntBASIC12.41□□□□□ -0.42
Clip3B9EHT4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.41□□□□□ -0.42
Clip3B9EHT4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.41□□□□□ -0.42
Clip3B9EHT4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clip3B9EHT4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm2231-201ENSMUST00000125661 612 ntBASIC12.4□□□□□ -0.42
Clip3B9EHT4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clip3B9EHT4 Gm37008-201ENSMUST00000195712 319 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms