Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gm12291-201ENSMUST00000121627 311 ntBASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gm14760-201ENSMUST00000121831 999 ntBASIC14.12□□□□□ -0.15
Brpf3B2KF05 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.12□□□□□ -0.15
Brpf3B2KF05 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.11□□□□□ -0.15
Brpf3B2KF05 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.11□□□□□ -0.15
Brpf3B2KF05 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm38223-201ENSMUST00000194484 695 ntBASIC14.11□□□□□ -0.15
Brpf3B2KF05 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm6458-201ENSMUST00000211573 635 ntBASIC14.11□□□□□ -0.15
Brpf3B2KF05 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Brpf3B2KF05 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm14716-201ENSMUST00000120138 718 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm15487-201ENSMUST00000122373 465 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm6736-201ENSMUST00000166583 948 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm44069-201ENSMUST00000204898 506 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm20445-201ENSMUST00000061905 565 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.1□□□□□ -0.15
Brpf3B2KF05 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brpf3B2KF05 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms