Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm5616-201ENSMUST00000165252 384 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm8741-201ENSMUST00000174736 384 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm29615-201ENSMUST00000185371 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28224-201ENSMUST00000186078 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm29001-201ENSMUST00000186177 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28292-201ENSMUST00000186593 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28101-201ENSMUST00000187608 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm29076-201ENSMUST00000187689 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28302-201ENSMUST00000187931 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28646-201ENSMUST00000188220 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28205-201ENSMUST00000189177 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm29032-201ENSMUST00000189797 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm28695-201ENSMUST00000190300 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm37448-201ENSMUST00000192795 697 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm7848-201ENSMUST00000210739 718 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Gm14644-201ENSMUST00000116671 647 ntBASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.06□□□□□ -0.16
Scn3aA2ASI5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Mir5132-201ENSMUST00000175166 71 ntBASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn3aA2ASI5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gm9555-201ENSMUST00000200908 583 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gm5455-201ENSMUST00000058710 715 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gm45598-202ENSMUST00000210719 986 ntBASIC14.05□□□□□ -0.16
Scn3aA2ASI5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn3aA2ASI5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms