Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Trav18A0A075B656 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.43□□□□□ -0.74
Trav18A0A075B656 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.43□□□□□ -0.74
Trav18A0A075B656 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.43□□□□□ -0.74
Trav18A0A075B656 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav18A0A075B656 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Gm11618-201ENSMUST00000117946 267 ntBASIC10.42□□□□□ -0.74
Trav18A0A075B656 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Gm8463-201ENSMUST00000208573 613 ntBASIC10.42□□□□□ -0.74
Trav18A0A075B656 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.42□□□□□ -0.74
Trav18A0A075B656 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav18A0A075B656 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav18A0A075B656 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms