Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav8-1A0A075B641 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm6539-201ENSMUST00000119157 1064 ntBASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Mir3113-201ENSMUST00000175478 76 ntBASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav8-1A0A075B641 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Mir125a-201ENSMUST00000083545 68 ntBASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav8-1A0A075B641 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms