Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm7029-201ENSMUST00000173226 450 ntBASIC12.74□□□□□ -0.37
H2afb2S4R1M3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb2S4R1M3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm16177-201ENSMUST00000120728 718 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm26927-201ENSMUST00000182385 965 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm29127-201ENSMUST00000188304 517 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb2S4R1M3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms