Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm9522-201ENSMUST00000182394 926 ntBASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cx3cr1Q9Z0D9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm11594-201ENSMUST00000122313 162 ntBASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm38223-201ENSMUST00000194484 695 ntBASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm26035-201ENSMUST00000083065 308 ntBASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cx3cr1Q9Z0D9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cx3cr1Q9Z0D9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cx3cr1Q9Z0D9 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.77□□□□□ -0.69
Cx3cr1Q9Z0D9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms