Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atp6ap1Q9R1Q9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atp6ap1Q9R1Q9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Atp6ap1Q9R1Q9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms