Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcn2Q9R0A1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Daam2-202ENSMUST00000224595 1926 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm10156-201ENSMUST00000122364 462 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm38671-201ENSMUST00000200573 130 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcn2Q9R0A1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gm12390-201ENSMUST00000117897 397 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gm11803-201ENSMUST00000119966 444 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gm44124-201ENSMUST00000204159 472 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcn2Q9R0A1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clcn2Q9R0A1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms