Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.28□□□□□ -0.12
AmfrQ9R049 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AmfrQ9R049 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
AmfrQ9R049 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.27□□□□□ -0.12
AmfrQ9R049 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.27□□□□□ -0.12
AmfrQ9R049 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.27□□□□□ -0.12
AmfrQ9R049 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AmfrQ9R049 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.27□□□□□ -0.13
AmfrQ9R049 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Gm27682-201ENSMUST00000183930 110 ntBASIC14.27□□□□□ -0.13
AmfrQ9R049 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.27□□□□□ -0.13
AmfrQ9R049 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.27□□□□□ -0.13
AmfrQ9R049 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
AmfrQ9R049 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
AmfrQ9R049 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AmfrQ9R049 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
AmfrQ9R049 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Gm37424-201ENSMUST00000191727 561 ntBASIC14.26□□□□□ -0.13
AmfrQ9R049 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.26□□□□□ -0.13
AmfrQ9R049 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.26□□□□□ -0.13
AmfrQ9R049 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.26□□□□□ -0.13
AmfrQ9R049 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AmfrQ9R049 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Gm13369-201ENSMUST00000119442 987 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Gm27514-201ENSMUST00000183692 110 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Gm40466-201ENSMUST00000212174 422 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.25□□□□□ -0.13
AmfrQ9R049 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms