Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm6458-201ENSMUST00000211573 635 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.59□□□□□ -0.55
Clcf1Q9QZM3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clcf1Q9QZM3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.58□□□□□ -0.55
Clcf1Q9QZM3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Gm26185-201ENSMUST00000157692 266 ntBASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Gm9823-201ENSMUST00000051212 327 ntBASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clcf1Q9QZM3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clcf1Q9QZM3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms