Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.41□□□□□ -0.1
Nr2e3Q9QXZ7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gm42693-201ENSMUST00000196779 631 ntBASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gm43118-201ENSMUST00000199149 775 ntBASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gm22058-201ENSMUST00000083393 310 ntBASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nr2e3Q9QXZ7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nr2e3Q9QXZ7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm6023-201ENSMUST00000118217 606 ntBASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm11964-201ENSMUST00000120982 444 ntBASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm13316-201ENSMUST00000140537 691 ntBASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr2e3Q9QXZ7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm15703-201ENSMUST00000120250 880 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm11793-201ENSMUST00000120433 981 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms