Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Gm11964-201ENSMUST00000120982 444 ntBASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf3Q9QXK7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm15370-201ENSMUST00000117158 253 ntBASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Gm43179-201ENSMUST00000198797 275 ntBASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cpsf3Q9QXK7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm10434-201ENSMUST00000101158 471 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm4986-201ENSMUST00000119731 549 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Gm9368-201ENSMUST00000219348 831 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Morn2-202ENSMUST00000227729 656 ntBASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf3Q9QXK7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms