Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3aQ9JKX8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Mir1247-201ENSMUST00000116706 82 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm13736-201ENSMUST00000119272 253 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm17420-201ENSMUST00000164753 153 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm44405-201ENSMUST00000198952 126 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm9823-201ENSMUST00000051212 327 ntBASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3aQ9JKX8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm6023-201ENSMUST00000118217 606 ntBASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm45925-201ENSMUST00000218882 744 ntBASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm10478-201ENSMUST00000084451 396 ntBASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3aQ9JKX8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms