Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm12015-201ENSMUST00000117065 843 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm26361-201ENSMUST00000158868 186 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm32999-201ENSMUST00000192693 562 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm43138-201ENSMUST00000199123 708 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm18753-201ENSMUST00000201000 566 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.57□□□□□ -0.4
OtofQ9ESF1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
OtofQ9ESF1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm11930-201ENSMUST00000117788 190 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm7003-201ENSMUST00000195089 312 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.56□□□□□ -0.4
OtofQ9ESF1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
OtofQ9ESF1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms