Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
U2af1Q9D883 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
U2af1Q9D883 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
U2af1Q9D883 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
U2af1Q9D883 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
U2af1Q9D883 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
U2af1Q9D883 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.76■□□□□ 0.27
U2af1Q9D883 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm11964-201ENSMUST00000120982 444 ntBASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm38341-201ENSMUST00000195357 515 ntBASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm44405-201ENSMUST00000198952 126 ntBASIC16.75■□□□□ 0.27
U2af1Q9D883 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.75■□□□□ 0.27
U2af1Q9D883 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
U2af1Q9D883 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
U2af1Q9D883 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.74■□□□□ 0.27
U2af1Q9D883 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm7584-201ENSMUST00000175829 940 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm44364-201ENSMUST00000198368 141 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm7783-201ENSMUST00000204795 781 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm45925-201ENSMUST00000218882 744 ntBASIC16.74■□□□□ 0.27
U2af1Q9D883 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
U2af1Q9D883 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
U2af1Q9D883 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.73■□□□□ 0.27
U2af1Q9D883 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Gm13736-201ENSMUST00000119272 253 ntBASIC16.73■□□□□ 0.27
U2af1Q9D883 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.73■□□□□ 0.27
U2af1Q9D883 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Gm2546-201ENSMUST00000182630 991 ntBASIC16.73■□□□□ 0.27
U2af1Q9D883 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.73■□□□□ 0.27
U2af1Q9D883 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
U2af1Q9D883 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.72■□□□□ 0.27
U2af1Q9D883 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms