Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop56Q9D6Z1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop56Q9D6Z1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nop56Q9D6Z1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nop56Q9D6Z1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm23935-201ENSMUST00000102303 57 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm24270-201ENSMUST00000102326 57 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm24245-201ENSMUST00000157318 57 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm7775-201ENSMUST00000218871 853 ntBASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.19□□□□□ -0.3
Nop56Q9D6Z1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nop56Q9D6Z1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gm14701-201ENSMUST00000117156 348 ntBASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gm43575-201ENSMUST00000196420 516 ntBASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Gm43094-201ENSMUST00000196549 921 ntBASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nop56Q9D6Z1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms