Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.02□□□□□ -0.17
Cfap53Q9D439 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.02□□□□□ -0.17
Cfap53Q9D439 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cfap53Q9D439 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm14704-201ENSMUST00000120300 874 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm37042-201ENSMUST00000193816 581 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm7561-201ENSMUST00000211203 886 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.01□□□□□ -0.17
Cfap53Q9D439 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cfap53Q9D439 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm8131-201ENSMUST00000213783 1570 ntBASIC14□□□□□ -0.17
Cfap53Q9D439 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14□□□□□ -0.17
Cfap53Q9D439 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm17208-201ENSMUST00000168388 535 ntBASIC14□□□□□ -0.17
Cfap53Q9D439 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm18916-201ENSMUST00000198264 1246 ntBASIC14□□□□□ -0.17
Cfap53Q9D439 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm8099-201ENSMUST00000200510 742 ntBASIC14□□□□□ -0.17
Cfap53Q9D439 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Cdk7-205ENSMUST00000225990 1159 ntBASIC14□□□□□ -0.17
Cfap53Q9D439 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cfap53Q9D439 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cfap53Q9D439 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.99□□□□□ -0.17
Cfap53Q9D439 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.99□□□□□ -0.17
Cfap53Q9D439 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap53Q9D439 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms