Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Gm5779-201ENSMUST00000218467 910 ntBASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.81□□□□□ -0.36
Trim42Q9D2H5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gm43575-201ENSMUST00000196420 516 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gm7774-201ENSMUST00000200064 533 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim42Q9D2H5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms