Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.09□□□□□ -0.31
Vps28Q9D1C8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps28Q9D1C8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps28Q9D1C8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps28Q9D1C8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps28Q9D1C8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm6007-201ENSMUST00000208170 823 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm45331-201ENSMUST00000209868 554 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps28Q9D1C8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Snord83b-201ENSMUST00000104546 94 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm23363-201ENSMUST00000175024 79 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps28Q9D1C8 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms