Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.97□□□□□ -0.01
Smc3Q9CW03 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Gm38671-201ENSMUST00000200573 130 ntBASIC14.97□□□□□ -0.01
Smc3Q9CW03 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.97□□□□□ -0.01
Smc3Q9CW03 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Mir339-201ENSMUST00000083659 96 ntBASIC14.97□□□□□ -0.01
Smc3Q9CW03 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc3Q9CW03 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Gm8805-201ENSMUST00000117848 313 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.96□□□□□ -0.01
Smc3Q9CW03 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smc3Q9CW03 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.96□□□□□ -0.01
Smc3Q9CW03 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smc3Q9CW03 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.96□□□□□ -0.02
Smc3Q9CW03 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm13612-201ENSMUST00000119276 390 ntBASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm5866-201ENSMUST00000177881 973 ntBASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm27701-201ENSMUST00000184498 110 ntBASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm28911-201ENSMUST00000188837 117 ntBASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.95□□□□□ -0.02
Smc3Q9CW03 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smc3Q9CW03 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms