Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Otud1Q9CUB6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm38092-201ENSMUST00000195600 653 ntBASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm8227-201ENSMUST00000223306 571 ntBASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Otud1Q9CUB6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm24548-201ENSMUST00000158650 108 ntBASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm45574-201ENSMUST00000210921 331 ntBASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Otud1Q9CUB6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms