Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Gm8805-201ENSMUST00000117848 313 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Gm13123-201ENSMUST00000122173 492 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Gm2231-201ENSMUST00000125661 612 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Paupar-201ENSMUST00000194826 3482 ntBASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Proscos-202ENSMUST00000178990 666 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm8099-201ENSMUST00000200510 742 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm17794-201ENSMUST00000220252 955 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm8598-201ENSMUST00000221184 836 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
H2afb1Q9CQ70 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms