Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim33Q99PP7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.71□□□□□ -0.37
Trim33Q99PP7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim33Q99PP7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim33Q99PP7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.7□□□□□ -0.38
Trim33Q99PP7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.7□□□□□ -0.38
Trim33Q99PP7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Gm43433-201ENSMUST00000196573 481 ntBASIC12.7□□□□□ -0.38
Trim33Q99PP7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.7□□□□□ -0.38
Trim33Q99PP7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.7□□□□□ -0.38
Trim33Q99PP7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms