Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Gm9083-201ENSMUST00000120423 819 ntBASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Gm12176-201ENSMUST00000121420 875 ntBASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim34aQ99PP6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm23200-201ENSMUST00000104379 132 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm12314-201ENSMUST00000118104 538 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm11597-201ENSMUST00000121423 964 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm43378-201ENSMUST00000199336 582 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim34aQ99PP6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Gm24749-201ENSMUST00000157838 343 ntBASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Gm45598-202ENSMUST00000210719 986 ntBASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim34aQ99PP6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm17812-201ENSMUST00000204935 318 ntBASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim34aQ99PP6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms