Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Mir6407-201ENSMUST00000184510 101 ntBASIC12.62□□□□□ -0.39
Cdh23Q99PF4 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.62□□□□□ -0.39
Cdh23Q99PF4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm43912-201ENSMUST00000204352 538 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm15566-201ENSMUST00000121130 590 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm18514-201ENSMUST00000218980 436 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.61□□□□□ -0.39
Cdh23Q99PF4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm22920-201ENSMUST00000102175 109 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm11578-201ENSMUST00000118530 459 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh23Q99PF4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms