Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm12899-201ENSMUST00000120565 551 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm18463-201ENSMUST00000207258 474 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm9132-201ENSMUST00000210182 832 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Gm35713-201ENSMUST00000210516 199 ntBASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm15515-201ENSMUST00000117827 822 ntBASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.21□□□□□ -0.29
Col25a1Q99MQ5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col25a1Q99MQ5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm12380-201ENSMUST00000119012 544 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm42518-201ENSMUST00000196277 938 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm1821-202ENSMUST00000227415 750 ntBASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Snora73b-201ENSMUST00000083419 205 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms