Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15703-201ENSMUST00000120250 880 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm28071-201ENSMUST00000190355 478 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm44545-201ENSMUST00000208262 746 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm5369-201ENSMUST00000217499 588 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.42□□□□□ -0.26
Clp1Q99LI9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.42□□□□□ -0.26
Clp1Q99LI9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm15131-201ENSMUST00000119124 595 ntBASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm27438-201ENSMUST00000183480 110 ntBASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm19353-201ENSMUST00000184561 445 ntBASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm42937-201ENSMUST00000197360 752 ntBASIC13.41□□□□□ -0.26
Clp1Q99LI9 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.41□□□□□ -0.26
Clp1Q99LI9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clp1Q99LI9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm15515-201ENSMUST00000117827 822 ntBASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm12208-201ENSMUST00000122004 163 ntBASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm44551-201ENSMUST00000208804 171 ntBASIC13.4□□□□□ -0.26
Clp1Q99LI9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clp1Q99LI9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms