Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cstf3Q99LI7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cstf3Q99LI7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cstf3Q99LI7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cstf3Q99LI7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cstf3Q99LI7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.32□□□□□ -0.44
Cstf3Q99LI7 Gm6745-201ENSMUST00000199216 526 ntBASIC12.32□□□□□ -0.44
Cstf3Q99LI7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cstf3Q99LI7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms