Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha3Q91Y16 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gm7029-201ENSMUST00000173226 450 ntBASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gm37042-201ENSMUST00000193816 581 ntBASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Gm19163-201ENSMUST00000223313 780 ntBASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha3Q91Y16 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Gm17420-201ENSMUST00000164753 153 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdha3Q91Y16 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha3Q91Y16 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdha3Q91Y16 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.33□□□□□ -0.27
Pcdha3Q91Y16 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm8062-201ENSMUST00000139696 444 ntBASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm16379-201ENSMUST00000161469 348 ntBASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm8762-201ENSMUST00000193486 339 ntBASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha3Q91Y16 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms