Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb22Q91XZ8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb22Q91XZ8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb22Q91XZ8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb22Q91XZ8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb22Q91XZ8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gm43133-201ENSMUST00000197472 463 ntBASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gm5904-201ENSMUST00000210286 865 ntBASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gm45930-201ENSMUST00000221330 292 ntBASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb22Q91XZ8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm13392-201ENSMUST00000117708 150 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Mir1938-201ENSMUST00000158746 100 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm17420-201ENSMUST00000164753 153 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm18054-201ENSMUST00000207539 555 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm9899-201ENSMUST00000065519 555 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm26035-201ENSMUST00000083065 308 ntBASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb22Q91XZ8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb22Q91XZ8 Mir1247-201ENSMUST00000116706 82 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms