Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Gm5356-201ENSMUST00000093326 615 ntBASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga11Q91XY8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Gm8463-201ENSMUST00000208573 613 ntBASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga11Q91XY8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms