Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm13786-201ENSMUST00000122371 333 ntBASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm7809-201ENSMUST00000153199 742 ntBASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm26185-201ENSMUST00000157692 266 ntBASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx41Q91VN6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm13342-201ENSMUST00000121055 207 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm29396-201ENSMUST00000185659 716 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm7783-201ENSMUST00000204795 781 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx41Q91VN6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.65□□□□□ -0.07
Ddx41Q91VN6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ddx41Q91VN6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Gm7584-201ENSMUST00000175829 940 ntBASIC14.64□□□□□ -0.07
Ddx41Q91VN6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.64□□□□□ -0.07
Ddx41Q91VN6 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms