Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.58□□□□□ -0.07
Trim29Q8R2Q0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.58□□□□□ -0.07
Trim29Q8R2Q0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim29Q8R2Q0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.58□□□□□ -0.07
Trim29Q8R2Q0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim29Q8R2Q0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm4768-201ENSMUST00000206199 686 ntBASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm19163-201ENSMUST00000223313 780 ntBASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.57□□□□□ -0.08
Trim29Q8R2Q0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim29Q8R2Q0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms