Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Atf7Q8R0S1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf7Q8R0S1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm6266-201ENSMUST00000203844 806 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm40466-201ENSMUST00000212174 422 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm24526-201ENSMUST00000082921 158 ntBASIC15.03■□□□□ -0
Atf7Q8R0S1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atf7Q8R0S1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.03■□□□□ -0
Atf7Q8R0S1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Atf7Q8R0S1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Atf7Q8R0S1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
Atf7Q8R0S1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Atf7Q8R0S1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf7Q8R0S1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.02■□□□□ -0
Atf7Q8R0S1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atf7Q8R0S1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf7Q8R0S1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms