Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cchcr1Q8K2I2 Gm11803-201ENSMUST00000119966 444 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm14928-201ENSMUST00000120198 477 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm22121-201ENSMUST00000175148 54 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cchcr1Q8K2I2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm26185-201ENSMUST00000157692 266 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm8810-201ENSMUST00000172895 754 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm9630-201ENSMUST00000178304 885 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm37042-201ENSMUST00000193816 581 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm44124-201ENSMUST00000204159 472 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm10012-201ENSMUST00000078252 192 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm5356-201ENSMUST00000093326 615 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cchcr1Q8K2I2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cchcr1Q8K2I2 Pck2-205ENSMUST00000226352 2784 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms