Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm26185-201ENSMUST00000157692 266 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm37042-201ENSMUST00000193816 581 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm10268-201ENSMUST00000085340 555 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfwd3Q8CIK8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Gm4768-201ENSMUST00000206199 686 ntBASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfwd3Q8CIK8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 n-R5s77-201ENSMUST00000083757 119 ntBASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Gm5620-201ENSMUST00000077991 1348 ntBASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms