Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm14350-201ENSMUST00000116642 640 ntBASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm16372-201ENSMUST00000073088 450 ntBASIC12.86□□□□□ -0.35
Clip4Q8CI96 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.86□□□□□ -0.35
Clip4Q8CI96 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.86□□□□□ -0.35
Clip4Q8CI96 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clip4Q8CI96 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.85□□□□□ -0.35
Clip4Q8CI96 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Gm6447-201ENSMUST00000118905 835 ntBASIC12.85□□□□□ -0.35
Clip4Q8CI96 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.85□□□□□ -0.35
Clip4Q8CI96 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.85□□□□□ -0.35
Clip4Q8CI96 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.85□□□□□ -0.35
Clip4Q8CI96 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.85□□□□□ -0.35
Clip4Q8CI96 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Gm13226-201ENSMUST00000117838 404 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms