Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm19078-201ENSMUST00000206311 727 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm9063-201ENSMUST00000223299 582 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc28bQ8CEG5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Gm15376-201ENSMUST00000122258 783 ntBASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Gm22175-201ENSMUST00000175007 78 ntBASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Gm17837-201ENSMUST00000186435 985 ntBASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms